Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015818089.1_cds_XP_016499451.1_13369
CDS Infomation

[gene=LOC107818048] [db_xref=GeneID:107818048] [protein=probable myosin-binding protein 5 isoform X2] [protein_id=XP_016499451.1] [location=complement(join(8989..9194,9297..10148,10629..11364))] [gbkey=CDS]
Sequence

ATGGCTTCGCGATCTTTTAAGCGTTTGGTTGAACAGAAGATGGGGAGAGTTGGGGTTTTC
TTCATATATGCTATTCTTGAATGGGTGATGATCATTATTCTTTTCATTGATGGCTTTCTT
GCATTTTTCACCAATGAATTCGCTAAATTCTTCGAACTGAAAGTTCCCTGCTTGCTATGC
ACGAGAATCGATCACATTTTCATTAAAAGAAACTCCAGTTTCTATTATAATGATTCCATT
TGCGAAGTTCACAAGAAGGACATCTCTTCCCTTGCGTATTGTCATGTCCACAAGAAGCTT
TCTGATATTAGGAACATGTGTGAAGGCTGCCTTCTCTCATTTGCAACAGAGAAGGATTCT
GATTGTGATAGGTACAAGTCATTAGTTGGGATTTTGCATAAAGACATTGATTGCTTTGTG
GATGGAGATGATCAGAGAGTTTCCATAAAATCAGTGAAGAATGAAGATGAGGTCATCAAA
ACAGGAGCTGTTGTTATCCTGAGGTGTTCTTGTTGTGGGGAGCCTCTGAAATTGAGGTCT
AAATATTTGCGGAACTCGTCTATAAATGAAAATATTTATTCTCAAGCTCCTGCCCCGTCT
CCTCGATCTCCCTTGACAATATGGAGAAATGAGGAATCGCGCAATCTAGAATTGCCTCAT
TTCCGGTACACAGAGCTCAAGTTTACCTCAGAAAATGACTCGGACCTTCCAGATGATGAG
GGTCACCAAAATGCAGGTAGAGATGATATTAAAGCTGCTAGTGTCCCACTTCTACCAGAT
CCTGAGGACATACATGATGATTCTTGCAAAACCCCAAATTCTGCAAGAAATAAATTCTTT
GGAATCCCATTGTCAGACTCAGCTCAAGCCAGTCCTAAGTGGCCTTATAGGCCCAGAAAA
TTGGGTGGTGATAAGAGTGAATTCATTTCAGATGCTAATGACACGAGTGCAGCAGACGAT
GACATCTTGCATCGCTTAAAGAGGCAGGTTCGTCTGGACCGAAAGTCTCTCATGGAACTG
TACATGGAATTGGATGAAGAAAGAAGTGCCTCTGCTGTTGCAGCAAACAATGCCATGGCA
ATGATCACGCGCTTGCAAGCAGAGAAGGCAGCTGTCCAAATGGAAGCATTGCAATATCAG
AGAATGATGGAAGAACAAGCAGAATATGACCAAGAGGCCTTGCAAGTCATGAAAGACCTA
GTTTTGAAGAGGGAGGAAGAGATAAAGGTATTGGAGGCTGAACTCGAGACCTACAGGGAG
AAATATGGACATATCAAGAAAGTAGGTAGTGAGGTCTGTGAAGTCGATGCAGATGATGAT
TATCAAGAGTTGAAATCTCATTCTGTATCATCCTTCGGTGAAAGATCAGACTGTGGCAGT
CCTCGTGAAGTAGATCAAGATGGAGTAAACGAGCTCCATATTGAACGTCCTAGGGAATAT
GGAGAGGGAATTGTTGATCAATCAAACCTTGATTTTGAGAACGAGAGATCTTATCTACAG
GGTTTGTTGACAAACCTTGAAAAGAAGATTAAAATACCTCCTGATGTTGAATCTCATGTG
TTAGAGCCTAATGTTATTCAAGAAAGAGGAAATGAGAATAAGGTTACCCTTACAAGAGAA
GTGTCTCTAATCAGAGAGAGATTGAGAGCTGTAGAAGCAGAAAGTGGCTTCTTAAAACAC
GCGGCCATGACATTACAGAGGGGTGGAGAAGGAACAAAACTCTTGACTGAGATAGCTCAA
CATCTGCGGGAGCTTAGATACTCTGATACAGCAACAGGGAATGCAGATGCATGA

Peptide Sequence

PEP ID

XP_016499451.1
PEP Infomation

PREDICTED: probable myosin-binding protein 5 isoform X2 [Nicotiana tabacum]
Sequence

MASRSFKRLVEQKMGRVGVFFIYAILEWVMIIILFIDGFLAFFTNEFAKFFELKVPCLLC
TRIDHIFIKRNSSFYYNDSICEVHKKDISSLAYCHVHKKLSDIRNMCEGCLLSFATEKDS
DCDRYKSLVGILHKDIDCFVDGDDQRVSIKSVKNEDEVIKTGAVVILRCSCCGEPLKLRS
KYLRNSSINENIYSQAPAPSPRSPLTIWRNEESRNLELPHFRYTELKFTSENDSDLPDDE
GHQNAGRDDIKAASVPLLPDPEDIHDDSCKTPNSARNKFFGIPLSDSAQASPKWPYRPRK
LGGDKSEFISDANDTSAADDDILHRLKRQVRLDRKSLMELYMELDEERSASAVAANNAMA
MITRLQAEKAAVQMEALQYQRMMEEQAEYDQEALQVMKDLVLKREEEIKVLEAELETYRE
KYGHIKKVGSEVCEVDADDDYQELKSHSVSSFGERSDCGSPREVDQDGVNELHIERPREY
GEGIVDQSNLDFENERSYLQGLLTNLEKKIKIPPDVESHVLEPNVIQERGNENKVTLTRE
VSLIRERLRAVEAESGFLKHAAMTLQRGGEGTKLLTEIAQHLRELRYSDTATGNADA

Transcript Sequence

Gene sequence data has not been registered.